Title | Medium-term variability of the human serum metabolome in the Atherosclerosis Risk in Communities (ARIC) study. |
Publication Type | Journal Article |
Year of Publication | 2014 |
Authors | Zheng Y, Yu B, Alexander D, Couper DJ |
Secondary Authors | Boerwinkle E |
Journal | OMICS |
Volume | 18 |
Issue | 6 |
Pagination | 364-73 |
Date Published | 2014 Jun |
ISSN | 1557-8100 |
Keywords | Atherosclerosis, Chromatography, Liquid, Female, Gas Chromatography-Mass Spectrometry, Humans, Male, Mass Spectrometry, Metabolome, Middle Aged, Serum |
Abstract | Metabolomics is a systems biology tool providing small molecule signatures of disease etiology. In order to estimate the biologic variability of the human serum metabolome, this study calculated intraclass correlation coefficients (ICCs) for 178 stably-detected metabolites measured by untargeted chromatography/mass spectrometry. We studied a subsample of 60 participants (57% males, 70% Caucasians, aged 73.77±5.3 years) in the Atherosclerosis Risk in Communities (ARIC) Study who provided two fasting serum samples 4-6 weeks apart. The median ICC across all metabolites was 0.60, and 82% of metabolites had at least fair variability (i.e., ICC>= 0.40). There was variation in the medium-term variability among metabolites, with those in the pathways of amino acid and lipid metabolism showing relatively high ICCs, and those in the carbohydrate pathway showing relatively low ICCs. The results of this study provide a valuable resource for future study design and outcome interpretation of mass spectrometry-based metabolomic studies in epidemiology. |
DOI | 10.1089/omi.2014.0019 |
Alternate Journal | OMICS |
PubMed ID | 24910946 |
PubMed Central ID | PMC4048570 |
Grant List | HHSN268201100005C / / PHS HHS / United States HHSN268201100009C / / PHS HHS / United States 3U01HG004402-02S1 / HG / NHGRI NIH HHS / United States U01 HG004402 / HG / NHGRI NIH HHS / United States HHSN268201100010C / / PHS HHS / United States HHSN268201100008C / / PHS HHS / United States HHSN268201100012C / / PHS HHS / United States HHSN268201100007C / / PHS HHS / United States HHSN268201100011C / / PHS HHS / United States HHSN268201100006C / / PHS HHS / United States |