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Rare coding variants associated with blood pressure variation in 15 914 individuals of African ancestry.

TitleRare coding variants associated with blood pressure variation in 15 914 individuals of African ancestry.
Publication TypeJournal Article
Year of Publication2017
AuthorsNandakumar P, Lee D, Richard MA, Tekola-Ayele F, Tayo BO, Ware E, Sung YJ, Salako B, Ogunniyi A, Gu CC, Grove ML, Fornage M, Kardia S, Rotimi C, Cooper RS, Morrison AC, Ehret G
Secondary AuthorsChakravarti A
JournalJ Hypertens
Volume35
Issue7
Pagination1381-1389
Date Published2017 07
ISSN1473-5598
KeywordsAfrican Continental Ancestry Group, Blood Pressure, Cardiovascular Diseases, Cohort Studies, Exome, Genetic Variation, Genotype, Humans, Hypertension, Risk Factors
Abstract

OBJECTIVES: Hypertension is a major risk factor for all cardiovascular diseases, especially among African Americans. This study focuses on identifying specific blood pressure (BP) genes using 15 914 individuals of African ancestry from eight cohorts (Africa America Diabetes Mellitus, Atherosclerosis Risk in Communities Study, Coronary Artery Risk Development in young Adults, Genetics Network, Genetic Epidemiology Network of Arteriopathy, Howard University Family Study, Hypertension Genetic Epidemiology Network, and Loyola University Chicago Cohort) to further genetic findings in this population which has generally been underrepresented in BP studies.

METHODS: We genotyped and performed various single variant and gene-based exome-wide analyses on 15 914 individuals on the Illumina HumanExome Beadchip v1.0 or v1.1 to test association with SBP and DBP long-term average residuals that were adjusted for age, age-squared, sex, and BMI.

RESULTS: We identified rare variants affecting SBP and DBP in 10 genes: AFF1, GAPDHS, SLC28A3, COL6A1, CRYBA2, KRBA1, SEL1L3, YOD1, CCDC13, and QSOX1. Prior experimental evidence for six of these 10 candidate genes supports their involvement in cardiovascular mechanisms, corroborating their potential roles in BP regulation.

CONCLUSION: Although our results require replication or validation due to their low numbers of carriers, and an ethnicity-specific genotyping array may be more informative, this study, which has identified several candidate genes in this population most susceptible to hypertension, presents one of the largest African-ancestry BP studies to date and the largest including analysis of rare variants.

DOI10.1097/HJH.0000000000001319
Alternate JournalJ Hypertens
PubMed ID28234671
PubMed Central IDPMC5451310
Grant List / RA / ARRA NIH HHS / United States
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HHSN268201100007I / HL / NHLBI NIH HHS / United States
HHSN268201100009I / HL / NHLBI NIH HHS / United States
HHSN268201100007C / HL / NHLBI NIH HHS / United States
HHSN268201300027C / HL / NHLBI NIH HHS / United States
HHSN268201100011C / HL / NHLBI NIH HHS / United States
RC2 HL102419 / HL / NHLBI NIH HHS / United States
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HHSN268201100008I / HL / NHLBI NIH HHS / United States
U01 HL054496 / HL / NHLBI NIH HHS / United States
M01 RR010284 / RR / NCRR NIH HHS / United States
U10 HL054481 / HL / NHLBI NIH HHS / United States
R01 HL087660 / HL / NHLBI NIH HHS / United States
U01 HL054473 / HL / NHLBI NIH HHS / United States
U10 HL054457 / HL / NHLBI NIH HHS / United States
U01 HL054457 / HL / NHLBI NIH HHS / United States
U10 HL054497 / HL / NHLBI NIH HHS / United States
HHSN268200900041C / HL / NHLBI NIH HHS / United States
HHSN268201100012C / HL / NHLBI NIH HHS / United States
HHSN268201300029C / HL / NHLBI NIH HHS / United States
T32 GM007814 / GM / NIGMS NIH HHS / United States
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T37 TW000041 / TW / FIC NIH HHS / United States
U10 HL054509 / HL / NHLBI NIH HHS / United States
HHSN268201100005C / HL / NHLBI NIH HHS / United States
HHSN268201100005G / HL / NHLBI NIH HHS / United States
R01 HL128782 / HL / NHLBI NIH HHS / United States
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R01 DK075787 / DK / NIDDK NIH HHS / United States
HHSN268201100011I / HL / NHLBI NIH HHS / United States
HHSN268201100010C / HL / NHLBI NIH HHS / United States
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HHSN268201100008C / HL / NHLBI NIH HHS / United States
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HHSN268201300025C / HL / NHLBI NIH HHS / United States
R37 HL045508 / HL / NHLBI NIH HHS / United States