Title | Multi-Ethnic Genome-Wide Association Study of Decomposed Cardioelectric Phenotypes Illustrates Strategies to Identify and Characterize Evidence of Shared Genetic Effects for Complex Traits. |
Publication Type | Journal Article |
Year of Publication | 2020 |
Authors | Baldassari AR, Sitlani CM, Highland HM, Arking DE, Buyske S, Darbar D, Gondalia R, Graff M, Guo X, Heckbert SR, Hindorff LA, Hodonsky CJ, Chen Y-DIda, Kaplan RC, Peters U, Post W, Reiner AP, Rotter JI, Shohet RV, Seyerle AA, Sotoodehnia N, Tao R, Taylor KD, Wojcik GL, Yao J, Kenny EE, Lin HJ, Soliman EZ, Whitsel EA, North KE, Kooperberg C |
Secondary Authors | Avery CL |
Journal | Circ Genom Precis Med |
Volume | 13 |
Issue | 4 |
Pagination | e002680 |
Date Published | 2020 Aug |
ISSN | 2574-8300 |
Abstract | BACKGROUND: We examined how expanding electrocardiographic trait genome-wide association studies to include ancestrally diverse populations, prioritize more precise phenotypic measures, and evaluate evidence for shared genetic effects enabled the detection and characterization of loci. METHODS: We decomposed 10 seconds, 12-lead electrocardiograms from 34 668 multi-ethnic participants (15% Black; 30% Hispanic/Latino) into 6 contiguous, physiologically distinct (P wave, PR segment, QRS interval, ST segment, T wave, and TP segment) and 2 composite, conventional (PR interval and QT interval) interval scale traits and conducted multivariable-adjusted, trait-specific univariate genome-wide association studies using 1000-G imputed single-nucleotide polymorphisms. Evidence of shared genetic effects was evaluated by aggregating meta-analyzed univariate results across the 6 continuous electrocardiographic traits using the combined phenotype adaptive sum of powered scores test. RESULTS: We identified 6 novels (, and ) and 87 known loci (adaptive sum of powered score test CONCLUSIONS: Despite including one-third as many participants as published electrocardiographic trait genome-wide association studies, our study identified 6 novel loci, emphasizing the importance of ancestral diversity and phenotype resolution in this era of ever-growing genome-wide association studies. |
DOI | 10.1161/CIRCGEN.119.002680 |
Alternate Journal | Circ Genom Precis Med |
PubMed ID | 32602732 |
PubMed Central ID | PMC7520945 |
Grant List | 75N95020D00003 / DA / NIDA NIH HHS / United States N01HC95160 / HL / NHLBI NIH HHS / United States N01HC95169 / HL / NHLBI NIH HHS / United States T32 HL129982 / HL / NHLBI NIH HHS / United States U01 HG009080 / HG / NHGRI NIH HHS / United States 75N99020D00007 / OF / ORFDO NIH HHS / United States UL1 TR001881 / TR / NCATS NIH HHS / United States 75N99020D00004 / OF / ORFDO NIH HHS / United States HHSN268201100001I / HL / NHLBI NIH HHS / United States HHSN268201500003C / HL / NHLBI NIH HHS / United States 75N90020D00002 / CL / CLC NIH HHS / United States U01 HG007419 / HG / NHGRI NIH HHS / United States UL1 RR025005 / RR / NCRR NIH HHS / United States R01 ES020836 / ES / NIEHS NIH HHS / United States N01HC95163 / HL / NHLBI NIH HHS / United States UL1 TR001079 / TR / NCATS NIH HHS / United States 75N96020D00002 / ES / NIEHS NIH HHS / United States HHSN268201100004I / HL / NHLBI NIH HHS / United States U01 HG007416 / HG / NHGRI NIH HHS / United States 75N93020D00002 / AI / NIAID NIH HHS / United States U01 HG009610 / HG / NHGRI NIH HHS / United States 75N99020D00003 / OF / ORFDO NIH HHS / United States HHSN268201100046C / HL / NHLBI NIH HHS / United States 75N95020D00002 / DA / NIDA NIH HHS / United States R01 HL086694 / HL / NHLBI NIH HHS / United States N01HC65236 / HL / NHLBI NIH HHS / United States L30 HG009840 / HG / NHGRI NIH HHS / United States R01 HL138737 / HL / NHLBI NIH HHS / United States HHSN268201100003C / WH / WHI NIH HHS / United States U01 HG007376 / HG / NHGRI NIH HHS / United States N01HC65235 / HL / NHLBI NIH HHS / United States U01 HG004402 / HG / NHGRI NIH HHS / United States N01HC95164 / HL / NHLBI NIH HHS / United States N02HL64278 / HL / NHLBI NIH HHS / United States N01HC95162 / HL / NHLBI NIH HHS / United States N01HC65234 / HL / NHLBI NIH HHS / United States N01HC95168 / HL / NHLBI NIH HHS / United States HHSN268201200008C / HL / NHLBI NIH HHS / United States 75N90020D00003 / CL / CLC NIH HHS / United States 75N96020D00003 / ES / NIEHS NIH HHS / United States P30 DK063491 / DK / NIDDK NIH HHS / United States 75N99020D00002 / OF / ORFDO NIH HHS / United States N01HC65233 / HL / NHLBI NIH HHS / United States HHSN268201700002C / HL / NHLBI NIH HHS / United States R01 DK101855 / DK / NIDDK NIH HHS / United States HHSN268201700001I / HL / NHLBI NIH HHS / United States 75N99020D00006 / OF / ORFDO NIH HHS / United States N01HC65237 / HL / NHLBI NIH HHS / United States HHSN271201100004C / AG / NIA NIH HHS / United States HHSN268201700004I / HL / NHLBI NIH HHS / United States N01HC95165 / HL / NHLBI NIH HHS / United States N01HC95159 / HL / NHLBI NIH HHS / United States 75N95020D00007 / DA / NIDA NIH HHS / United States N01HC95161 / HL / NHLBI NIH HHS / United States T32 HL139439 / HL / NHLBI NIH HHS / United States HHSN268201100002C / WH / WHI NIH HHS / United States UL1 TR001420 / TR / NCATS NIH HHS / United States R01 HL104608 / HL / NHLBI NIH HHS / United States 75N95020D00005 / DA / NIDA NIH HHS / United States HHSN268201500003I / HL / NHLBI NIH HHS / United States R01 HL142825 / HL / NHLBI NIH HHS / United States HHSN268201700005C / HL / NHLBI NIH HHS / United States HHSN268201700001C / HL / NHLBI NIH HHS / United States 75N99020D00005 / OF / ORFDO NIH HHS / United States N01HC95167 / HL / NHLBI NIH HHS / United States HHSN268201700003C / HL / NHLBI NIH HHS / United States HHSN268201700004C / HL / NHLBI NIH HHS / United States UL1 TR000040 / TR / NCATS NIH HHS / United States HHSN268201100003I / HL / NHLBI NIH HHS / United States HHSN268201100002I / HL / NHLBI NIH HHS / United States HHSN268201700002I / HL / NHLBI NIH HHS / United States HHSN268201700005I / HL / NHLBI NIH HHS / United States 75N98020D00007 / OD / NIH HHS / United States N01HC95166 / HL / NHLBI NIH HHS / United States R01 HL087641 / HL / NHLBI NIH HHS / United States HHSN268201700003I / HL / NHLBI NIH HHS / United States HHSN268201200008I / HL / NHLBI NIH HHS / United States HHSN268201100001C / WH / WHI NIH HHS / United States 75N95020D00004 / DA / NIDA NIH HHS / United States HHSN268201100004C / WH / WHI NIH HHS / United States R01 HL111089 / HL / NHLBI NIH HHS / United States R01 HL116747 / HL / NHLBI NIH HHS / United States |