Title | GWAS Identifies New Loci for Painful Temporomandibular Disorder: Hispanic Community Health Study/Study of Latinos. |
Publication Type | Publication |
Year | 2017 |
Authors | Sanders AE, Jain D, Sofer T, Kerr KF, Laurie CC, Shaffer JR, Marazita ML, Kaste LM, Slade GD, Fillingim RB, Ohrbach R, Maixner W, Kocher T, Bernhardt O, Teumer A, Schwahn C, Sipilä K, Lähdesmäki R, Männikkö M, Pesonen P, Järvelin M, Rizzatti-Barbosa CM, Meloto CB, Ribeiro-Dasilva M, Diatchenko L, Serrano P, Smith SB |
Journal | J Dent Res |
Volume | 96 |
Issue | 3 |
Pagination | 277-284 |
Date Published | 2017 Mar |
ISSN | 1544-0591 |
Keywords | Brazil, Case-Control Studies, Dystrophin, Female, Finland, Genetic Loci, Genetic Predisposition to Disease, genome-wide association study, Genotype, Germany, Hispanic or Latino, Humans, Male, Phenotype, Polymorphism, Single Nucleotide, Prevalence, Receptors, G-Protein-Coupled, Sarcoglycans, Sp4 Transcription Factor, Surveys and Questionnaires, Temporomandibular Joint Disorders, United States |
Abstract | Temporomandibular disorder (TMD) is a musculoskeletal condition characterized by pain and reduced function in the temporomandibular joint and/or associated masticatory musculature. Prevalence in the United States is 5% and twice as high among women as men. We conducted a discovery genome-wide association study (GWAS) of TMD in 10,153 participants (769 cases, 9,384 controls) of the US Hispanic Community Health Study/Study of Latinos (HCHS/SOL). The most promising single-nucleotide polymorphisms (SNPs) were tested in meta-analysis of 4 independent cohorts. One replication cohort was from the United States, and the others were from Germany, Finland, and Brazil, totaling 1,911 TMD cases and 6,903 controls. A locus near the sarcoglycan alpha ( SGCA), rs4794106, was suggestive in the discovery analysis ( P = 2.6 × 10) and replicated (i.e., 1-tailed P = 0.016) in the Brazilian cohort. In the discovery cohort, sex-stratified analysis identified 2 additional genome-wide significant loci in females. One lying upstream of the relaxin/insulin-like family peptide receptor 2 ( RXP2) (chromosome 13, rs60249166, odds ratio [OR] = 0.65, P = 3.6 × 10) was replicated among females in the meta-analysis (1-tailed P = 0.052). The other (chromosome 17, rs1531554, OR = 0.68, P = 2.9 × 10) was replicated among females (1-tailed P = 0.002), as well as replicated in meta-analysis of both sexes (1-tailed P = 0.021). A novel locus at genome-wide level of significance (rs73460075, OR = 0.56, P = 3.8 × 10) in the intron of the dystrophin gene DMD (X chromosome), and a suggestive locus on chromosome 7 (rs73271865, P = 2.9 × 10) upstream of the Sp4 Transcription Factor ( SP4) gene were identified in the discovery cohort, but neither of these was replicated. The SGCA gene encodes SGCA, which is involved in the cellular structure of muscle fibers and, along with DMD, forms part of the dystrophin-glycoprotein complex. Functional annotation suggested that several of these variants reside in loci that regulate processes relevant to TMD pathobiologic processes. |
DOI | 10.1177/0022034516686562 |
Alternate Journal | J Dent Res |
PubMed ID | 28081371 |
PubMed Central ID | PMC5298397 |
Grant List | R01 HL087679 / HL / NHLBI NIH HHS / United States R01 DK072193 / DK / NIDDK NIH HHS / United States N01HC65236 / HL / NHLBI NIH HHS / United States N01HC65235 / HL / NHLBI NIH HHS / United States UL1 TR000124 / TR / NCATS NIH HHS / United States N01HC65234 / HL / NHLBI NIH HHS / United States HHSN268201200008C / HL / NHLBI NIH HHS / United States P30 AG028740 / AG / NIA NIH HHS / United States R01 DK101855 / DK / NIDDK NIH HHS / United States N01HC65237 / HL / NHLBI NIH HHS / United States U01 DE017018 / DE / NIDCR NIH HHS / United States RL1 MH083268 / MH / NIMH NIH HHS / United States HHSN268201200008I / HL / NHLBI NIH HHS / United States HHSN268201300005C / HL / NHLBI NIH HHS / United States R01 MH063706 / MH / NIMH NIH HHS / United States P30 DK063491 / DK / NIDDK NIH HHS / United States N01HC65233 / HL / NHLBI NIH HHS / United States |
GWAS Identifies New Loci for Painful Temporomandibular Disorder: Hispanic Community Health Study/Study of Latinos.
MS#:
0380
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